Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 RCC2P3-201ENST00000418112 1537 ntBASIC21.22■□□□□ 0.99
SHC4Q6S5L8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 AP000692.2-201ENST00000608391 879 ntBASIC21.21■□□□□ 0.99
SHC4Q6S5L8 AC008622.2-201ENST00000617006 1229 ntBASIC21.21■□□□□ 0.99
SHC4Q6S5L8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHC4Q6S5L8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 AC079598.2-202ENST00000546624 1451 ntBASIC21.2■□□□□ 0.98
SHC4Q6S5L8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.2■□□□□ 0.98
SHC4Q6S5L8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 CD177P1-201ENST00000606252 935 ntBASIC21.2■□□□□ 0.98
SHC4Q6S5L8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 AC018470.1-201ENST00000624790 3129 ntBASIC21.2■□□□□ 0.98
SHC4Q6S5L8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHC4Q6S5L8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 NOC2LP1-202ENST00000452600 2235 ntBASIC21.19■□□□□ 0.98
SHC4Q6S5L8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 FSCN1P1-201ENST00000568912 1481 ntBASIC21.19■□□□□ 0.98
SHC4Q6S5L8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHC4Q6S5L8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms