Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD3Q6PCD5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 AC008622.2-201ENST00000617006 1229 ntBASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.57■□□□□ 0.72
RFWD3Q6PCD5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 AC141586.3-201ENST00000562166 1838 ntBASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD3Q6PCD5 IRX1P1-201ENST00000438849 1838 ntBASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 AC104076.2-201ENST00000448912 469 ntBASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 MIR4674-201ENST00000582457 87 ntBASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 AC010331.1-201ENST00000611423 582 ntBASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD3Q6PCD5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 KRT8P45-201ENST00000414328 1447 ntBASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 AL138966.2-201ENST00000621997 464 ntBASIC19.54■□□□□ 0.72
RFWD3Q6PCD5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms