Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 REXO1L6P-202ENST00000619970 1078 ntBASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.2■□□□□ 0.82
CNKSR3Q6P9H4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.19■□□□□ 0.82
CNKSR3Q6P9H4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 AP000593.1-201ENST00000393668 712 ntBASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 AL590627.1-203ENST00000421194 1026 ntBASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 AC064862.7-201ENST00000604520 867 ntBASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNKSR3Q6P9H4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 AL137060.1-201ENST00000618151 2648 ntBASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 NUS1P2-201ENST00000417358 873 ntBASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 AL671883.3-201ENST00000603274 991 ntBASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CNKSR3Q6P9H4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 AF238378.1-201ENST00000526806 358 ntBASIC20.16■□□□□ 0.82
CNKSR3Q6P9H4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms