Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM53Q6P2H8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 HTR7P1-202ENST00000624664 4411 ntBASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM53Q6P2H8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM53Q6P2H8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms