Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF9Q5VWM5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF9Q5VWM5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF9Q5VWM5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF9Q5VWM5 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF9Q5VWM5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF9Q5VWM5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 AL390955.1-201ENST00000428694 934 ntBASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 AP005242.2-201ENST00000580065 1175 ntBASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 MIR4674-201ENST00000582457 87 ntBASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF9Q5VWM5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 AC008556.1-201ENST00000610908 2040 ntBASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF9Q5VWM5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 AL023284.2-201ENST00000405850 579 ntBASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 MIR4785-201ENST00000585005 73 ntBASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 AP006294.2-201ENST00000641667 209 ntBASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF9Q5VWM5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 AC090164.3-201ENST00000610780 2143 ntBASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF9Q5VWM5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms