Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 FP475955.4-201ENST00000623131 1990 ntBASIC18.09■□□□□ 0.49
RNF220Q5VTB9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 AL391005.1-201ENST00000623953 2435 ntBASIC18.09■□□□□ 0.49
RNF220Q5VTB9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF220Q5VTB9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 TFP1-202ENST00000475455 1573 ntBASIC18.08■□□□□ 0.49
RNF220Q5VTB9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RNF220Q5VTB9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 HLA-B-256ENST00000639848 1089 ntBASIC18.08■□□□□ 0.48
RNF220Q5VTB9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 HTR7P1-202ENST00000624664 4411 ntBASIC18.08■□□□□ 0.48
RNF220Q5VTB9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
RNF220Q5VTB9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 AC097658.1-201ENST00000475555 843 ntBASIC18.07■□□□□ 0.48
RNF220Q5VTB9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF220Q5VTB9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF220Q5VTB9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms