Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 KRT17P3-201ENST00000420566 1262 ntBASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 KRT16P5-201ENST00000455284 522 ntBASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 PRSS44-201ENST00000515154 1146 ntBASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 AL445675.2-201ENST00000620291 557 ntBASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 MYC-208ENST00000641036 567 ntBASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 HCG11-201ENST00000411553 5696 ntBASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRIF1Q5T3J3 KRT8P45-201ENST00000414328 1447 ntBASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 AC112777.1-201ENST00000540175 1423 ntBASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRIF1Q5T3J3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 AC233263.1-201ENST00000578059 224 ntBASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.71■□□□□ 0.43
LRIF1Q5T3J3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
LRIF1Q5T3J3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRIF1Q5T3J3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRIF1Q5T3J3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRIF1Q5T3J3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms