Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 UNC93B2-201ENST00000285383 730 ntBASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 AL355075.4-201ENST00000554988 638 ntBASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 MIR4785-201ENST00000585005 73 ntBASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO1Q2MKA7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 FITM1-202ENST00000559294 800 ntBASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 MIR4497-201ENST00000583208 89 ntBASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 AP000525.1-201ENST00000608286 694 ntBASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO1Q2MKA7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.27■□□□□ 0.19
RSPO1Q2MKA7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 MIR564-202ENST00000385049 94 ntBASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 AL390955.1-201ENST00000428694 934 ntBASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 MIR4674-201ENST00000582457 87 ntBASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 AC135050.7-201ENST00000624508 2218 ntBASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 BICD1-207ENST00000551848 1962 ntBASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO1Q2MKA7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RSPO1Q2MKA7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms