Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.68□□□□□ -0.06
CFHR3Q02985 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CFHR3Q02985 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.67□□□□□ -0.06
CFHR3Q02985 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 AC008556.1-201ENST00000610908 2040 ntBASIC14.67□□□□□ -0.06
CFHR3Q02985 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.67□□□□□ -0.06
CFHR3Q02985 AP000523.1-201ENST00000398242 1049 ntBASIC14.67□□□□□ -0.06
CFHR3Q02985 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 AC139887.4-201ENST00000607877 719 ntBASIC14.67□□□□□ -0.06
CFHR3Q02985 AC083906.6-201ENST00000641366 219 ntBASIC14.67□□□□□ -0.06
CFHR3Q02985 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CFHR3Q02985 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CFHR3Q02985 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.67□□□□□ -0.06
CFHR3Q02985 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CFHR3Q02985 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CFHR3Q02985 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
CFHR3Q02985 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CFHR3Q02985 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CFHR3Q02985 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CFHR3Q02985 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 HEIH-201ENST00000623091 1652 ntBASIC14.66□□□□□ -0.06
CFHR3Q02985 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.66□□□□□ -0.06
CFHR3Q02985 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.66□□□□□ -0.06
CFHR3Q02985 DUX4L26-201ENST00000489078 1255 ntBASIC14.66□□□□□ -0.06
CFHR3Q02985 YBX1P2-201ENST00000489612 999 ntBASIC14.66□□□□□ -0.06
CFHR3Q02985 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.66□□□□□ -0.06
CFHR3Q02985 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.66□□□□□ -0.06
CFHR3Q02985 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.66□□□□□ -0.06
CFHR3Q02985 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.66□□□□□ -0.06
CFHR3Q02985 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 AL031432.5-201ENST00000641059 760 ntBASIC14.66□□□□□ -0.06
CFHR3Q02985 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.66□□□□□ -0.06
CFHR3Q02985 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CFHR3Q02985 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CFHR3Q02985 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms