Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 POM121L13P-201ENST00000422362 380 ntBASIC16.97■□□□□ 0.31
CDK5Q00535 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.97■□□□□ 0.31
CDK5Q00535 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.97■□□□□ 0.31
CDK5Q00535 AC098934.4-201ENST00000564127 592 ntBASIC16.97■□□□□ 0.31
CDK5Q00535 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.97■□□□□ 0.31
CDK5Q00535 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.97■□□□□ 0.31
CDK5Q00535 MYC-208ENST00000641036 567 ntBASIC16.97■□□□□ 0.31
CDK5Q00535 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDK5Q00535 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDK5Q00535 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDK5Q00535 ESPNP-201ENST00000270691 2015 ntBASIC16.97■□□□□ 0.31
CDK5Q00535 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5Q00535 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDK5Q00535 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5Q00535 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.96■□□□□ 0.31
CDK5Q00535 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDK5Q00535 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5Q00535 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5Q00535 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5Q00535 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5Q00535 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5Q00535 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.96■□□□□ 0.3
CDK5Q00535 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.96■□□□□ 0.3
CDK5Q00535 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDK5Q00535 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDK5Q00535 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CDK5Q00535 AC112777.1-201ENST00000540175 1423 ntBASIC16.96■□□□□ 0.3
CDK5Q00535 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CDK5Q00535 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDK5Q00535 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.95■□□□□ 0.3
CDK5Q00535 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDK5Q00535 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.95■□□□□ 0.3
CDK5Q00535 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.95■□□□□ 0.3
CDK5Q00535 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 AC004264.1-201ENST00000608354 794 ntBASIC16.95■□□□□ 0.3
CDK5Q00535 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.95■□□□□ 0.3
CDK5Q00535 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.95■□□□□ 0.3
CDK5Q00535 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.95■□□□□ 0.3
CDK5Q00535 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CDK5Q00535 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDK5Q00535 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5Q00535 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5Q00535 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDK5Q00535 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDK5Q00535 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.94■□□□□ 0.3
CDK5Q00535 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDK5Q00535 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDK5Q00535 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5Q00535 Z85996.1-201ENST00000494644 937 ntBASIC16.94■□□□□ 0.3
CDK5Q00535 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK5Q00535 AL138781.1-201ENST00000566567 1274 ntBASIC16.94■□□□□ 0.3
CDK5Q00535 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.94■□□□□ 0.3
CDK5Q00535 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.94■□□□□ 0.3
CDK5Q00535 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.94■□□□□ 0.3
CDK5Q00535 AC093677.2-201ENST00000600169 1863 ntBASIC16.94■□□□□ 0.3
CDK5Q00535 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK5Q00535 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms