Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.38■□□□□ 0.213e-7■□□□□ 9.7
LSM11P83369 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.77■□□□□ 0.123e-7■□□□□ 9.7
LSM11P83369 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.053e-7■□□□□ 9.7
LSM11P83369 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.063e-7■□□□□ 9.7
LSM11P83369 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.14□□□□□ -0.153e-7■□□□□ 9.7
LSM11P83369 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.22e-9■□□□□ 9.7
LSM11P83369 METTL3-210ENST00000543235 2124 ntTSL 513.28□□□□□ -0.283e-7■□□□□ 9.7
LSM11P83369 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.463e-7■□□□□ 9.7
LSM11P83369 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.483e-7■□□□□ 9.7
LSM11P83369 AKT2-216ENST00000476266 3309 ntTSL 512.03□□□□□ -0.482e-9■□□□□ 9.7
LSM11P83369 AKT2-218ENST00000483166 4454 ntTSL 212□□□□□ -0.492e-9■□□□□ 9.7
LSM11P83369 MRPL2-206ENST00000485654 428 ntTSL 211.66□□□□□ -0.543e-7■□□□□ 9.7
LSM11P83369 GCN1-206ENST00000549815 543 ntTSL 311.61□□□□□ -0.552e-9■□□□□ 9.7
LSM11P83369 METTL3-206ENST00000537163 2030 ntTSL 511.41□□□□□ -0.583e-7■□□□□ 9.7
LSM11P83369 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.632e-25■□□□□ 9.7
LSM11P83369 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.722e-25■□□□□ 9.7
LSM11P83369 METTL3-208ENST00000539760 1462 ntTSL 210.39□□□□□ -0.753e-7■□□□□ 9.7
LSM11P83369 METTL3-204ENST00000396522 2523 ntTSL 210.05□□□□□ -0.83e-7■□□□□ 9.7
LSM11P83369 FNBP4-209ENST00000530207 2917 ntTSL 29.8□□□□□ -0.842e-9■□□□□ 9.7
LSM11P83369 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.843e-7■□□□□ 9.7
LSM11P83369 THOC5-201ENST00000358079 2427 ntTSL 59.53□□□□□ -0.883e-7■□□□□ 9.7
LSM11P83369 FNBP4-211ENST00000532646 919 ntTSL 29.13□□□□□ -0.952e-9■□□□□ 9.7
LSM11P83369 THOC5-209ENST00000442555 3012 ntTSL 28.63□□□□□ -1.033e-7■□□□□ 9.7
LSM11P83369 THOC5-212ENST00000472164 529 ntTSL 28.2□□□□□ -1.13e-7■□□□□ 9.7
LSM11P83369 METTL3-212ENST00000544500 1789 ntTSL 27.87□□□□□ -1.153e-7■□□□□ 9.7
LSM11P83369 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.233e-7■□□□□ 9.7
LSM11P83369 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.444e-7■□□□□ 9.7
LSM11P83369 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.674e-7■□□□□ 9.7
LSM11P83369 RBM6-209ENST00000441115 1876 ntTSL 217■□□□□ 0.316e-7■□□□□ 9.7
LSM11P83369 CHKB-211ENST00000489453 722 ntTSL 29.13□□□□□ -0.954e-6■□□□□ 9.7
LSM11P83369 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.771e-10■□□□□ 9.7
LSM11P83369 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.631e-10■□□□□ 9.7
LSM11P83369 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.611e-10■□□□□ 9.7
LSM11P83369 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)11.96□□□□□ -0.491e-10■□□□□ 9.7
LSM11P83369 PEG3-208ENST00000599565 318 ntTSL 311.2□□□□□ -0.621e-10■□□□□ 9.7
LSM11P83369 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.991e-10■□□□□ 9.7
LSM11P83369 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.11e-10■□□□□ 9.7
LSM11P83369 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)7.79□□□□□ -1.161e-10■□□□□ 9.7
LSM11P83369 SLC22A31-203ENST00000563595 780 ntTSL 320.81■□□□□ 0.923e-11■□□□□ 9.7
LSM11P83369 CYC1-203ENST00000528618 831 ntTSL 516.25■□□□□ 0.197e-15■□□□□ 9.7
LSM11P83369 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.77■■□□□ 1.882e-8■□□□□ 9.7
LSM11P83369 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.82e-8■□□□□ 9.7
LSM11P83369 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.97■■□□□ 1.432e-8■□□□□ 9.7
LSM11P83369 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.18■□□□□ 0.982e-6■□□□□ 9.7
LSM11P83369 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.93■□□□□ 0.942e-6■□□□□ 9.7
LSM11P83369 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.912e-6■□□□□ 9.7
LSM11P83369 PON2-204ENST00000455123 1515 ntTSL 1 (best)20.38■□□□□ 0.852e-6■□□□□ 9.7
LSM11P83369 ARMC5-207ENST00000564900 2072 ntAPPRIS ALT2 TSL 219.92■□□□□ 0.782e-6■□□□□ 9.7
LSM11P83369 SRRT-218ENST00000620394 582 ntTSL 219.17■□□□□ 0.662e-6■□□□□ 9.7
LSM11P83369 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.092e-6■□□□□ 9.7
LSM11P83369 GPS1-206ENST00000578279 875 ntTSL 515.33■□□□□ 0.042e-6■□□□□ 9.7
LSM11P83369 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.012e-6■□□□□ 9.7
LSM11P83369 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 02e-6■□□□□ 9.7
LSM11P83369 DHRS1-210ENST00000561273 2027 ntTSL 514.83□□□□□ -0.042e-6■□□□□ 9.7
LSM11P83369 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.082e-6■□□□□ 9.7
LSM11P83369 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.182e-6■□□□□ 9.7
LSM11P83369 CENPT-223ENST00000566758 858 ntTSL 513.58□□□□□ -0.246e-9■□□□□ 9.7
LSM11P83369 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.242e-6■□□□□ 9.7
LSM11P83369 SRRT-214ENST00000614370 556 ntTSL 213.37□□□□□ -0.272e-6■□□□□ 9.7
LSM11P83369 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.272e-6■□□□□ 9.7
LSM11P83369 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.32e-6■□□□□ 9.7
LSM11P83369 CENPT-211ENST00000564128 2673 ntTSL 212.91□□□□□ -0.346e-9■□□□□ 9.7
LSM11P83369 DHRS1-204ENST00000558340 1623 ntTSL 512.55□□□□□ -0.42e-6■□□□□ 9.7
LSM11P83369 DHRS1-206ENST00000559088 719 ntTSL 312.39□□□□□ -0.432e-6■□□□□ 9.7
LSM11P83369 DHRS1-211ENST00000561281 1181 ntTSL 1 (best)12.18□□□□□ -0.462e-6■□□□□ 9.7
LSM11P83369 SDCCAG3-210ENST00000481114 340 ntTSL 211.86□□□□□ -0.512e-8■□□□□ 9.7
LSM11P83369 SDCCAG3-205ENST00000417512 626 ntTSL 211.38□□□□□ -0.592e-8■□□□□ 9.7
LSM11P83369 DHRS1-209ENST00000561137 2660 ntTSL 210.81□□□□□ -0.682e-6■□□□□ 9.7
LSM11P83369 DHRS1-205ENST00000559084 528 nt10.81□□□□□ -0.682e-6■□□□□ 9.7
LSM11P83369 SDCCAG3-207ENST00000461693 869 ntTSL 210.45□□□□□ -0.742e-8■□□□□ 9.7
LSM11P83369 PON2-211ENST00000483292 699 ntTSL 310.44□□□□□ -0.742e-6■□□□□ 9.7
LSM11P83369 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.762e-6■□□□□ 9.7
LSM11P83369 PON2-203ENST00000446142 1099 ntTSL 1 (best)9.07□□□□□ -0.962e-6■□□□□ 9.7
LSM11P83369 SDCCAG3-208ENST00000466579 496 ntTSL 1 (best)8.32□□□□□ -1.082e-8■□□□□ 9.7
LSM11P83369 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.519e-7■□□□□ 9.7
LSM11P83369 TFB1M-204ENST00000470239 433 ntTSL 311.84□□□□□ -0.511e-6■□□□□ 9.7
LSM11P83369 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.711e-6■□□□□ 9.7
LSM11P83369 TFB1M-203ENST00000468889 621 ntTSL 39.5□□□□□ -0.891e-6■□□□□ 9.7
LSM11P83369 TFB1M-209ENST00000495806 444 ntTSL 36.52□□□□□ -1.371e-6■□□□□ 9.7
LSM11P83369 TFB1M-208ENST00000489874 563 ntTSL 36.5□□□□□ -1.371e-6■□□□□ 9.7
LSM11P83369 HGD-203ENST00000470321 528 ntTSL 36.99□□□□□ -1.291e-8■□□□□ 9.6
LSM11P83369 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.26■□□□□ 0.671e-6■□□□□ 9.6
LSM11P83369 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.25■□□□□ 0.671e-6■□□□□ 9.6
LSM11P83369 MARCH3-202ENST00000502289 764 ntTSL 417.07■□□□□ 0.321e-6■□□□□ 9.6
LSM11P83369 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.41■□□□□ 0.221e-6■□□□□ 9.6
LSM11P83369 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.33■□□□□ 0.041e-6■□□□□ 9.6
LSM11P83369 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.134e-8■□□□□ 9.6
LSM11P83369 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.144e-8■□□□□ 9.6
LSM11P83369 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.51□□□□□ -0.251e-6■□□□□ 9.6
LSM11P83369 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.254e-8■□□□□ 9.6
LSM11P83369 SH3GLB2-210ENST00000477165 623 ntTSL 212.92□□□□□ -0.341e-6■□□□□ 9.6
LSM11P83369 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.354e-8■□□□□ 9.6
LSM11P83369 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.411e-6■□□□□ 9.6
LSM11P83369 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.471e-6■□□□□ 9.6
LSM11P83369 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.654e-8■□□□□ 9.6
LSM11P83369 FDPS-215ENST00000490140 680 ntTSL 210.36□□□□□ -0.754e-8■□□□□ 9.6
LSM11P83369 FDPS-217ENST00000492244 673 ntTSL 310.36□□□□□ -0.754e-8■□□□□ 9.6
LSM11P83369 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC10.32□□□□□ -0.764e-8■□□□□ 9.6
LSM11P83369 FDPS-214ENST00000489324 475 ntTSL 28.65□□□□□ -1.024e-8■□□□□ 9.6
LSM11P83369 SMYD3-212ENST00000483072 466 ntTSL 27.88□□□□□ -1.151e-6■□□□□ 9.6
Retrieved 100 of 11,495 protein–RNA pairs in 58.1 ms