Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 AFG3L1P-217ENST00000557444 2447 ntBASIC16.54■□□□□ 0.24
NKX6-1P78426 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-1P78426 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.54■□□□□ 0.24
NKX6-1P78426 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.54■□□□□ 0.24
NKX6-1P78426 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-1P78426 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.54■□□□□ 0.24
NKX6-1P78426 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-1P78426 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-1P78426 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
NKX6-1P78426 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NKX6-1P78426 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX6-1P78426 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NKX6-1P78426 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX6-1P78426 PCED1CP-201ENST00000419887 785 ntBASIC16.53■□□□□ 0.24
NKX6-1P78426 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.53■□□□□ 0.24
NKX6-1P78426 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX6-1P78426 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.53■□□□□ 0.24
NKX6-1P78426 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX6-1P78426 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX6-1P78426 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NKX6-1P78426 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-1P78426 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-1P78426 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NKX6-1P78426 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-1P78426 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-1P78426 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NKX6-1P78426 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX6-1P78426 SDHAP1-207ENST00000440850 2000 ntBASIC16.52■□□□□ 0.24
NKX6-1P78426 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.52■□□□□ 0.24
NKX6-1P78426 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NKX6-1P78426 SLC25A1P2-201ENST00000430693 912 ntBASIC16.52■□□□□ 0.24
NKX6-1P78426 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-1P78426 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-1P78426 MFAP1P1-201ENST00000442257 1255 ntBASIC16.52■□□□□ 0.24
NKX6-1P78426 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-1P78426 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-1P78426 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
NKX6-1P78426 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.52■□□□□ 0.24
NKX6-1P78426 AC093458.2-201ENST00000623150 629 ntBASIC16.52■□□□□ 0.24
NKX6-1P78426 AL121956.5-201ENST00000625261 221 ntBASIC16.52■□□□□ 0.24
NKX6-1P78426 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-1P78426 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms