Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAB1AP62820 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB1AP62820 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.52■□□□□ 0.23
RAB1AP62820 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RAB1AP62820 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB1AP62820 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB1AP62820 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB1AP62820 KRT8P9-201ENST00000558927 1449 ntBASIC16.52■□□□□ 0.23
RAB1AP62820 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB1AP62820 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB1AP62820 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1AP62820 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1AP62820 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 CYP2D8P-201ENST00000433633 1490 ntBASIC16.51■□□□□ 0.23
RAB1AP62820 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 SLC25A1P2-201ENST00000430693 912 ntBASIC16.51■□□□□ 0.23
RAB1AP62820 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 CCR12P-201ENST00000446203 998 ntBASIC16.51■□□□□ 0.23
RAB1AP62820 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1AP62820 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAB1AP62820 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.51■□□□□ 0.23
RAB1AP62820 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1AP62820 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 KRT8P3-201ENST00000519669 1449 ntBASIC16.51■□□□□ 0.23
RAB1AP62820 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB1AP62820 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB1AP62820 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.5■□□□□ 0.23
RAB1AP62820 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 AC087499.1-201ENST00000418141 1075 ntBASIC16.5■□□□□ 0.23
RAB1AP62820 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB1AP62820 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 AC004408.2-201ENST00000623613 2777 ntBASIC16.5■□□□□ 0.23
RAB1AP62820 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB1AP62820 AP000974.1-201ENST00000623909 2387 ntBASIC16.5■□□□□ 0.23
RAB1AP62820 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB1AP62820 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB1AP62820 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1AP62820 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB1AP62820 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1AP62820 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB1AP62820 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RAB1AP62820 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RAB1AP62820 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RAB1AP62820 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1AP62820 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB1AP62820 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1AP62820 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1AP62820 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB1AP62820 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB1AP62820 TSPY17P-201ENST00000450329 467 ntBASIC16.49■□□□□ 0.23
RAB1AP62820 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB1AP62820 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB1AP62820 EGLN1P1-201ENST00000531623 762 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms