Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SRP54P61011 STARP1-201ENST00000397973 869 ntBASIC18.52■□□□□ 0.56
SRP54P61011 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.52■□□□□ 0.56
SRP54P61011 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SRP54P61011 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.52■□□□□ 0.56
SRP54P61011 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SRP54P61011 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP54P61011 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.52■□□□□ 0.56
SRP54P61011 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.52■□□□□ 0.56
SRP54P61011 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRP54P61011 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SRP54P61011 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SRP54P61011 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
SRP54P61011 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRP54P61011 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRP54P61011 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRP54P61011 FEM1AP3-201ENST00000403722 1741 ntBASIC18.52■□□□□ 0.55
SRP54P61011 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.52■□□□□ 0.55
SRP54P61011 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP54P61011 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SRP54P61011 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP54P61011 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP54P61011 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP54P61011 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP54P61011 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP54P61011 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP54P61011 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 AC112907.2-201ENST00000448639 330 ntBASIC18.51■□□□□ 0.55
SRP54P61011 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SRP54P61011 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP54P61011 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.51■□□□□ 0.55
SRP54P61011 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.51■□□□□ 0.55
SRP54P61011 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.51■□□□□ 0.55
SRP54P61011 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.51■□□□□ 0.55
SRP54P61011 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRP54P61011 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.5■□□□□ 0.55
SRP54P61011 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.5■□□□□ 0.55
SRP54P61011 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
SRP54P61011 AFG3L1P-217ENST00000557444 2447 ntBASIC18.5■□□□□ 0.55
SRP54P61011 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SRP54P61011 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.5■□□□□ 0.55
SRP54P61011 FAM86EP-206ENST00000510506 987 ntBASIC18.5■□□□□ 0.55
SRP54P61011 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.5■□□□□ 0.55
SRP54P61011 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.5■□□□□ 0.55
SRP54P61011 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
SRP54P61011 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SRP54P61011 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SRP54P61011 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SRP54P61011 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.49■□□□□ 0.55
SRP54P61011 IRX1P1-201ENST00000438849 1838 ntBASIC18.49■□□□□ 0.55
SRP54P61011 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.49■□□□□ 0.55
SRP54P61011 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SRP54P61011 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 PCED1CP-201ENST00000419887 785 ntBASIC18.49■□□□□ 0.55
SRP54P61011 UPK3BP1-201ENST00000428678 509 ntBASIC18.49■□□□□ 0.55
SRP54P61011 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.49■□□□□ 0.55
SRP54P61011 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.49■□□□□ 0.55
SRP54P61011 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SRP54P61011 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SRP54P61011 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 AP000550.4-202ENST00000639755 178 ntBASIC18.49■□□□□ 0.55
SRP54P61011 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
SRP54P61011 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.49■□□□□ 0.55
SRP54P61011 AC141586.3-201ENST00000562166 1838 ntBASIC18.49■□□□□ 0.55
SRP54P61011 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SRP54P61011 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
SRP54P61011 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SRP54P61011 AL512353.2-201ENST00000448759 1962 ntBASIC18.48■□□□□ 0.55
SRP54P61011 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms