Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB38P57729 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RAB38P57729 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB38P57729 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB38P57729 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB38P57729 LIN28AP1-201ENST00000429574 405 ntBASIC17.65■□□□□ 0.42
RAB38P57729 AL137013.1-201ENST00000432946 1228 ntBASIC17.65■□□□□ 0.42
RAB38P57729 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.65■□□□□ 0.42
RAB38P57729 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB38P57729 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB38P57729 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAB38P57729 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 AC098818.2-201ENST00000564925 2320 ntBASIC17.65■□□□□ 0.42
RAB38P57729 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB38P57729 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAB38P57729 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB38P57729 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB38P57729 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB38P57729 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
RAB38P57729 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB38P57729 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB38P57729 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.64■□□□□ 0.42
RAB38P57729 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RAB38P57729 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RAB38P57729 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB38P57729 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 MIR564-202ENST00000385049 94 ntBASIC17.64■□□□□ 0.41
RAB38P57729 ATP5G1P1-201ENST00000448724 379 ntBASIC17.64■□□□□ 0.41
RAB38P57729 AC010203.1-204ENST00000548782 407 ntBASIC17.64■□□□□ 0.41
RAB38P57729 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
RAB38P57729 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB38P57729 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB38P57729 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB38P57729 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB38P57729 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB38P57729 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB38P57729 AL357033.4-201ENST00000617703 1807 ntBASIC17.63■□□□□ 0.41
RAB38P57729 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TERF1P1-201ENST00000311003 1181 ntBASIC17.63■□□□□ 0.41
RAB38P57729 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 AC005521.1-201ENST00000393351 872 ntBASIC17.63■□□□□ 0.41
RAB38P57729 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB38P57729 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB38P57729 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB38P57729 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB38P57729 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB38P57729 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB38P57729 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB38P57729 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB38P57729 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB38P57729 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB38P57729 TNXA-203ENST00000507684 2038 ntBASIC17.62■□□□□ 0.41
RAB38P57729 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB38P57729 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms