Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN12P56749 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN12P56749 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.35■□□□□ 0.21
CLDN12P56749 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CLDN12P56749 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN12P56749 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN12P56749 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CLDN12P56749 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN12P56749 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 AL499627.1-201ENST00000569373 2188 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN12P56749 AC139713.2-201ENST00000641328 2723 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN12P56749 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLDN12P56749 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN12P56749 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLDN12P56749 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN12P56749 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN12P56749 KRT18P16-201ENST00000510337 1294 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDN12P56749 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN12P56749 AC105036.2-201ENST00000569468 176 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 AC133552.2-202ENST00000575694 574 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 AL121906.2-201ENST00000621597 723 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLDN12P56749 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN12P56749 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN12P56749 AC106820.2-201ENST00000563775 3264 ntBASIC16.34■□□□□ 0.21
CLDN12P56749 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.33■□□□□ 0.21
CLDN12P56749 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.33■□□□□ 0.21
CLDN12P56749 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.33■□□□□ 0.21
CLDN12P56749 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN12P56749 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLDN12P56749 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLDN12P56749 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN12P56749 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN12P56749 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN12P56749 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN12P56749 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN12P56749 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN12P56749 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN12P56749 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 TUBB8P6-201ENST00000436895 1288 ntBASIC16.33■□□□□ 0.2
CLDN12P56749 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN12P56749 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN12P56749 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN12P56749 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN12P56749 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN12P56749 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN12P56749 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN12P56749 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN12P56749 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN12P56749 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CLDN12P56749 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN12P56749 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN12P56749 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CLDN12P56749 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN12P56749 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 ESPNP-201ENST00000270691 2015 ntBASIC16.32■□□□□ 0.2
CLDN12P56749 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CLDN12P56749 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN12P56749 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN12P56749 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms