Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR662-201ENST00000384847 95 ntBASIC18.03■□□□□ 0.48
CLDN6P56747 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN6P56747 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.03■□□□□ 0.48
CLDN6P56747 AP002469.2-201ENST00000531724 424 ntBASIC18.03■□□□□ 0.48
CLDN6P56747 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN6P56747 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN6P56747 AC112497.1-201ENST00000624824 639 ntBASIC18.03■□□□□ 0.48
CLDN6P56747 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 LINC00167-201ENST00000530583 1419 ntBASIC18.03■□□□□ 0.48
CLDN6P56747 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN6P56747 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN6P56747 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN6P56747 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 Z83836.1-201ENST00000624605 1642 ntBASIC18.02■□□□□ 0.48
CLDN6P56747 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CLDN6P56747 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN6P56747 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLDN6P56747 DRAXINP1-201ENST00000437611 948 ntBASIC18.02■□□□□ 0.48
CLDN6P56747 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN6P56747 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN6P56747 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN6P56747 MIR3917-201ENST00000580971 93 ntBASIC18.02■□□□□ 0.48
CLDN6P56747 AL121772.3-201ENST00000610840 674 ntBASIC18.02■□□□□ 0.48
CLDN6P56747 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.02■□□□□ 0.48
CLDN6P56747 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLDN6P56747 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN6P56747 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.02■□□□□ 0.47
CLDN6P56747 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN6P56747 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN6P56747 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN6P56747 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN6P56747 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN6P56747 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN6P56747 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 AP000593.1-201ENST00000393668 712 ntBASIC18.01■□□□□ 0.47
CLDN6P56747 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.01■□□□□ 0.47
CLDN6P56747 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN6P56747 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 AC112907.3-201ENST00000577781 2400 ntBASIC18.01■□□□□ 0.47
CLDN6P56747 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN6P56747 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN6P56747 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 AC099778.1-201ENST00000568593 1911 ntBASIC18■□□□□ 0.47
CLDN6P56747 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18■□□□□ 0.47
CLDN6P56747 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLDN6P56747 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18■□□□□ 0.47
CLDN6P56747 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 TSPY12P-201ENST00000421279 868 ntBASIC18■□□□□ 0.47
CLDN6P56747 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 KRT16P4-201ENST00000453883 522 ntBASIC18■□□□□ 0.47
CLDN6P56747 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18■□□□□ 0.47
CLDN6P56747 AL671883.3-201ENST00000603274 991 ntBASIC18■□□□□ 0.47
CLDN6P56747 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN6P56747 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN6P56747 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN6P56747 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18■□□□□ 0.47
CLDN6P56747 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN6P56747 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN6P56747 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms