Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH15P55291 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH15P55291 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH15P55291 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH15P55291 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.52■□□□□ 0.39
CDH15P55291 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 SIRPAP1-201ENST00000448467 1770 ntBASIC17.51■□□□□ 0.39
CDH15P55291 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 ZNF815P-204ENST00000434898 1737 ntBASIC17.51■□□□□ 0.39
CDH15P55291 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 MIR4758-201ENST00000577688 71 ntBASIC17.51■□□□□ 0.39
CDH15P55291 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CDH15P55291 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH15P55291 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH15P55291 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH15P55291 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 GNAS-203ENST00000306120 1878 ntBASIC17.5■□□□□ 0.39
CDH15P55291 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.5■□□□□ 0.39
CDH15P55291 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH15P55291 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 AC069236.1-201ENST00000604339 616 ntBASIC17.5■□□□□ 0.39
CDH15P55291 OR10C1-204ENST00000622521 1039 ntBASIC17.5■□□□□ 0.39
CDH15P55291 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH15P55291 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH15P55291 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH15P55291 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH15P55291 AC135776.1-201ENST00000319817 2481 ntBASIC17.49■□□□□ 0.39
CDH15P55291 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDH15P55291 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH15P55291 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CDH15P55291 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH15P55291 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH15P55291 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms