Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP1B3P54709 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP1B3P54709 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP1B3P54709 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
ATP1B3P54709 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1B3P54709 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ATP1B3P54709 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1B3P54709 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1B3P54709 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP1B3P54709 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP1B3P54709 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP1B3P54709 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATP1B3P54709 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ATP1B3P54709 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1B3P54709 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1B3P54709 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1B3P54709 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1B3P54709 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATP1B3P54709 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1B3P54709 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP1B3P54709 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 AC239809.2-201ENST00000415381 517 ntBASIC16.3■□□□□ 0.2
ATP1B3P54709 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP1B3P54709 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP1B3P54709 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 AL031598.1-201ENST00000561511 1773 ntBASIC16.3■□□□□ 0.2
ATP1B3P54709 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ATP1B3P54709 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP1B3P54709 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP1B3P54709 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 KRASP1-201ENST00000407852 552 ntBASIC16.29■□□□□ 0.2
ATP1B3P54709 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.29■□□□□ 0.2
ATP1B3P54709 KRT16P5-201ENST00000455284 522 ntBASIC16.29■□□□□ 0.2
ATP1B3P54709 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP1B3P54709 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP1B3P54709 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
ATP1B3P54709 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP1B3P54709 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP1B3P54709 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP1B3P54709 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms