Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.96■□□□□ 0.63
LIMK2P53671 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.95■□□□□ 0.62
LIMK2P53671 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK2P53671 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK2P53671 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.95■□□□□ 0.62
LIMK2P53671 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK2P53671 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.95■□□□□ 0.62
LIMK2P53671 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.95■□□□□ 0.62
LIMK2P53671 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 AP000525.1-201ENST00000608286 694 ntBASIC18.95■□□□□ 0.62
LIMK2P53671 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.95■□□□□ 0.62
LIMK2P53671 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LIMK2P53671 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK2P53671 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK2P53671 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LIMK2P53671 AC007613.1-201ENST00000572811 2597 ntBASIC18.94■□□□□ 0.62
LIMK2P53671 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LIMK2P53671 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK2P53671 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.94■□□□□ 0.62
LIMK2P53671 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK2P53671 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK2P53671 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK2P53671 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK2P53671 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK2P53671 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK2P53671 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.94■□□□□ 0.62
LIMK2P53671 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LIMK2P53671 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK2P53671 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.94■□□□□ 0.62
LIMK2P53671 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LIMK2P53671 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
LIMK2P53671 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.93■□□□□ 0.62
LIMK2P53671 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LIMK2P53671 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.93■□□□□ 0.62
LIMK2P53671 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LIMK2P53671 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.93■□□□□ 0.62
LIMK2P53671 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LIMK2P53671 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.93■□□□□ 0.62
LIMK2P53671 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.93■□□□□ 0.62
LIMK2P53671 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.93■□□□□ 0.62
LIMK2P53671 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.93■□□□□ 0.62
LIMK2P53671 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.93■□□□□ 0.62
LIMK2P53671 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 AC145285.6-201ENST00000604632 637 ntBASIC18.93■□□□□ 0.62
LIMK2P53671 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.93■□□□□ 0.62
LIMK2P53671 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.93■□□□□ 0.62
LIMK2P53671 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.93■□□□□ 0.62
LIMK2P53671 KRT8P41-201ENST00000533985 1514 ntBASIC18.93■□□□□ 0.62
LIMK2P53671 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LIMK2P53671 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIMK2P53671 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMK2P53671 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.92■□□□□ 0.62
LIMK2P53671 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 AL390961.4-201ENST00000623958 2535 ntBASIC18.92■□□□□ 0.62
LIMK2P53671 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.92■□□□□ 0.62
LIMK2P53671 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMK2P53671 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIMK2P53671 MIR1238-201ENST00000408483 83 ntBASIC18.92■□□□□ 0.62
LIMK2P53671 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.92■□□□□ 0.62
LIMK2P53671 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.92■□□□□ 0.62
LIMK2P53671 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.92■□□□□ 0.62
LIMK2P53671 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms