Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.69■□□□□ 0.58
CXCL12P48061 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.69■□□□□ 0.58
CXCL12P48061 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.69■□□□□ 0.58
CXCL12P48061 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.69■□□□□ 0.58
CXCL12P48061 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.69■□□□□ 0.58
CXCL12P48061 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.69■□□□□ 0.58
CXCL12P48061 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.69■□□□□ 0.58
CXCL12P48061 AC011840.4-201ENST00000578471 627 ntBASIC18.69■□□□□ 0.58
CXCL12P48061 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.69■□□□□ 0.58
CXCL12P48061 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CXCL12P48061 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CXCL12P48061 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.68■□□□□ 0.58
CXCL12P48061 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CXCL12P48061 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CXCL12P48061 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CXCL12P48061 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCL12P48061 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.68■□□□□ 0.58
CXCL12P48061 POM121L3P-201ENST00000419331 1163 ntBASIC18.68■□□□□ 0.58
CXCL12P48061 RNA5SP419-201ENST00000515908 135 ntBASIC18.68■□□□□ 0.58
CXCL12P48061 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCL12P48061 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.68■□□□□ 0.58
CXCL12P48061 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.68■□□□□ 0.58
CXCL12P48061 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.68■□□□□ 0.58
CXCL12P48061 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CXCL12P48061 TP73-AS1-207ENST00000624167 988 ntBASIC18.68■□□□□ 0.58
CXCL12P48061 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 GABARAPL3-202ENST00000624044 1851 ntBASIC18.68■□□□□ 0.58
CXCL12P48061 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCL12P48061 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.68■□□□□ 0.58
CXCL12P48061 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CXCL12P48061 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CXCL12P48061 AC034236.2-201ENST00000606662 1610 ntBASIC18.67■□□□□ 0.58
CXCL12P48061 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 AC099778.1-201ENST00000568593 1911 ntBASIC18.67■□□□□ 0.58
CXCL12P48061 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CXCL12P48061 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCL12P48061 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 AC093909.1-201ENST00000504731 1122 ntBASIC18.67■□□□□ 0.58
CXCL12P48061 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.67■□□□□ 0.58
CXCL12P48061 KRT18P58-201ENST00000527480 1120 ntBASIC18.67■□□□□ 0.58
CXCL12P48061 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.67■□□□□ 0.58
CXCL12P48061 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.67■□□□□ 0.58
CXCL12P48061 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.67■□□□□ 0.58
CXCL12P48061 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.67■□□□□ 0.58
CXCL12P48061 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.67■□□□□ 0.58
CXCL12P48061 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCL12P48061 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CXCL12P48061 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL12P48061 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CXCL12P48061 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL12P48061 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL12P48061 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL12P48061 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL12P48061 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CXCL12P48061 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
CXCL12P48061 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL12P48061 AL031284.1-201ENST00000419297 478 ntBASIC18.66■□□□□ 0.58
CXCL12P48061 AF186996.4-201ENST00000467186 377 ntBASIC18.66■□□□□ 0.58
CXCL12P48061 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.66■□□□□ 0.58
CXCL12P48061 AP005901.3-202ENST00000581653 237 ntBASIC18.66■□□□□ 0.58
CXCL12P48061 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 AL353692.3-201ENST00000407031 1396 ntBASIC18.66■□□□□ 0.58
CXCL12P48061 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL12P48061 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL12P48061 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
CXCL12P48061 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCL12P48061 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CXCL12P48061 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.65■□□□□ 0.58
CXCL12P48061 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.65■□□□□ 0.58
CXCL12P48061 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms