Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.35■□□□□ 0.37
HTR3AP46098 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR3AP46098 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR3AP46098 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HTR3AP46098 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HTR3AP46098 RPS2P55-201ENST00000397318 883 ntBASIC17.34■□□□□ 0.37
HTR3AP46098 AC004951.3-201ENST00000418645 1148 ntBASIC17.34■□□□□ 0.37
HTR3AP46098 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.34■□□□□ 0.37
HTR3AP46098 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR3AP46098 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR3AP46098 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.34■□□□□ 0.37
HTR3AP46098 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.34■□□□□ 0.37
HTR3AP46098 AC107956.1-201ENST00000494359 873 ntBASIC17.34■□□□□ 0.37
HTR3AP46098 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.34■□□□□ 0.37
HTR3AP46098 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR3AP46098 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.34■□□□□ 0.37
HTR3AP46098 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.34■□□□□ 0.37
HTR3AP46098 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR3AP46098 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
HTR3AP46098 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.34■□□□□ 0.37
HTR3AP46098 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTR3AP46098 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HTR3AP46098 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.33■□□□□ 0.37
HTR3AP46098 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.33■□□□□ 0.37
HTR3AP46098 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HTR3AP46098 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.33■□□□□ 0.37
HTR3AP46098 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 IRX1P1-201ENST00000438849 1838 ntBASIC17.33■□□□□ 0.37
HTR3AP46098 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HTR3AP46098 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.33■□□□□ 0.37
HTR3AP46098 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTR3AP46098 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
HTR3AP46098 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.33■□□□□ 0.36
HTR3AP46098 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HTR3AP46098 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.33■□□□□ 0.36
HTR3AP46098 PRSS44-201ENST00000515154 1146 ntBASIC17.33■□□□□ 0.36
HTR3AP46098 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HTR3AP46098 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 CROCCP3-202ENST00000420820 1947 ntBASIC17.33■□□□□ 0.36
HTR3AP46098 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HTR3AP46098 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTR3AP46098 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.33■□□□□ 0.36
HTR3AP46098 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 FSCN1P1-201ENST00000568912 1481 ntBASIC17.32■□□□□ 0.36
HTR3AP46098 AL161938.1-201ENST00000569833 2180 ntBASIC17.32■□□□□ 0.36
HTR3AP46098 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR3AP46098 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HTR3AP46098 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR3AP46098 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
HTR3AP46098 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 MIR718-201ENST00000390190 70 ntBASIC17.32■□□□□ 0.36
HTR3AP46098 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.32■□□□□ 0.36
HTR3AP46098 AC233702.5-201ENST00000584107 538 ntBASIC17.32■□□□□ 0.36
HTR3AP46098 CD177P1-201ENST00000606252 935 ntBASIC17.32■□□□□ 0.36
HTR3AP46098 AP006294.2-201ENST00000641667 209 ntBASIC17.32■□□□□ 0.36
HTR3AP46098 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HTR3AP46098 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms