Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CHRNA4P43681 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA4P43681 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHRNA4P43681 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA4P43681 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
CHRNA4P43681 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CHRNA4P43681 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.96■□□□□ 0.63
CHRNA4P43681 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 GPAT2P1-201ENST00000444924 1672 ntBASIC18.95■□□□□ 0.62
CHRNA4P43681 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 AL499627.1-201ENST00000569373 2188 ntBASIC18.95■□□□□ 0.62
CHRNA4P43681 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA4P43681 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHRNA4P43681 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA4P43681 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.95■□□□□ 0.62
CHRNA4P43681 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA4P43681 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA4P43681 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA4P43681 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.95■□□□□ 0.62
CHRNA4P43681 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.95■□□□□ 0.62
CHRNA4P43681 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHRNA4P43681 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA4P43681 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHRNA4P43681 MIR4674-201ENST00000582457 87 ntBASIC18.94■□□□□ 0.62
CHRNA4P43681 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA4P43681 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.94■□□□□ 0.62
CHRNA4P43681 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA4P43681 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHRNA4P43681 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.94■□□□□ 0.62
CHRNA4P43681 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.94■□□□□ 0.62
CHRNA4P43681 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHRNA4P43681 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 CYP2D8P-201ENST00000433633 1490 ntBASIC18.93■□□□□ 0.62
CHRNA4P43681 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.93■□□□□ 0.62
CHRNA4P43681 AL023284.2-201ENST00000405850 579 ntBASIC18.93■□□□□ 0.62
CHRNA4P43681 CA15P1-201ENST00000481698 905 ntBASIC18.93■□□□□ 0.62
CHRNA4P43681 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.93■□□□□ 0.62
CHRNA4P43681 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA4P43681 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 AC008556.1-201ENST00000610908 2040 ntBASIC18.93■□□□□ 0.62
CHRNA4P43681 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA4P43681 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.93■□□□□ 0.62
CHRNA4P43681 AL357033.4-201ENST00000617703 1807 ntBASIC18.93■□□□□ 0.62
CHRNA4P43681 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.93■□□□□ 0.62
CHRNA4P43681 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHRNA4P43681 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHRNA4P43681 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms