Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC087388.1-201ENST00000571370 1112 ntBASIC20.73■□□□□ 0.91
RFC5P40937 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC5P40937 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC5P40937 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC5P40937 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RFC5P40937 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC5P40937 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC5P40937 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFC5P40937 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RFC5P40937 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC5P40937 HOXB1-202ENST00000577092 1414 ntBASIC20.72■□□□□ 0.91
RFC5P40937 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.72■□□□□ 0.91
RFC5P40937 AL359075.1-203ENST00000462729 1002 ntBASIC20.72■□□□□ 0.91
RFC5P40937 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC5P40937 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RFC5P40937 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC5P40937 AC024243.1-201ENST00000609234 778 ntBASIC20.72■□□□□ 0.91
RFC5P40937 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.72■□□□□ 0.91
RFC5P40937 AC083906.6-201ENST00000641366 219 ntBASIC20.72■□□□□ 0.91
RFC5P40937 HEIH-201ENST00000623091 1652 ntBASIC20.72■□□□□ 0.91
RFC5P40937 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFC5P40937 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RFC5P40937 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RFC5P40937 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.71■□□□□ 0.91
RFC5P40937 AC034232.1-201ENST00000506026 1064 ntBASIC20.71■□□□□ 0.91
RFC5P40937 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC5P40937 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC5P40937 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC5P40937 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFC5P40937 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC5P40937 AC034236.2-201ENST00000606662 1610 ntBASIC20.71■□□□□ 0.91
RFC5P40937 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.7■□□□□ 0.91
RFC5P40937 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC5P40937 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
RFC5P40937 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC5P40937 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC5P40937 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC5P40937 KRT18P23-201ENST00000435622 1283 ntBASIC20.7■□□□□ 0.9
RFC5P40937 SEC1P-202ENST00000473944 940 ntBASIC20.7■□□□□ 0.9
RFC5P40937 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC5P40937 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC5P40937 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.7■□□□□ 0.9
RFC5P40937 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.7■□□□□ 0.9
RFC5P40937 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 AL049812.1-201ENST00000432563 2267 ntBASIC20.7■□□□□ 0.9
RFC5P40937 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFC5P40937 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RFC5P40937 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RFC5P40937 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RFC5P40937 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.69■□□□□ 0.9
RFC5P40937 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC5P40937 KRT18P38-201ENST00000449496 1282 ntBASIC20.69■□□□□ 0.9
RFC5P40937 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC5P40937 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RFC5P40937 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms