Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC110285.5-201ENST00000611501 352 ntBASIC20.58■□□□□ 0.89
KRT9P35527 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KRT9P35527 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT9P35527 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
KRT9P35527 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT9P35527 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT9P35527 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT9P35527 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT9P35527 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT9P35527 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
KRT9P35527 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT9P35527 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.57■□□□□ 0.88
KRT9P35527 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT9P35527 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 AC133681.1-201ENST00000465482 601 ntBASIC20.57■□□□□ 0.88
KRT9P35527 C1QBPP2-201ENST00000528754 825 ntBASIC20.57■□□□□ 0.88
KRT9P35527 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
KRT9P35527 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KRT9P35527 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
KRT9P35527 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRT9P35527 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
KRT9P35527 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KRT9P35527 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KRT9P35527 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 AC126763.1-201ENST00000552015 2118 ntBASIC20.56■□□□□ 0.88
KRT9P35527 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT9P35527 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT9P35527 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.56■□□□□ 0.88
KRT9P35527 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KRT9P35527 TSPY23P-201ENST00000440136 739 ntBASIC20.56■□□□□ 0.88
KRT9P35527 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT9P35527 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.56■□□□□ 0.88
KRT9P35527 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.56■□□□□ 0.88
KRT9P35527 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.56■□□□□ 0.88
KRT9P35527 C1QL1P1-201ENST00000568105 661 ntBASIC20.56■□□□□ 0.88
KRT9P35527 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT9P35527 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT9P35527 NOC2LP2-201ENST00000407594 1944 ntBASIC20.56■□□□□ 0.88
KRT9P35527 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.56■□□□□ 0.88
KRT9P35527 HCG11-201ENST00000411553 5696 ntBASIC20.56■□□□□ 0.88
KRT9P35527 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRT9P35527 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT9P35527 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT9P35527 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT9P35527 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT9P35527 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.55■□□□□ 0.88
KRT9P35527 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT9P35527 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
KRT9P35527 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.55■□□□□ 0.88
KRT9P35527 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.55■□□□□ 0.88
KRT9P35527 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT9P35527 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT9P35527 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KRT9P35527 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.54■□□□□ 0.88
KRT9P35527 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KRT9P35527 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 KRT18P29-201ENST00000397031 1267 ntBASIC20.54■□□□□ 0.88
KRT9P35527 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT9P35527 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT9P35527 AL160286.2-201ENST00000567150 934 ntBASIC20.54■□□□□ 0.88
KRT9P35527 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KRT9P35527 AC073592.3-201ENST00000625118 1834 ntBASIC20.54■□□□□ 0.88
KRT9P35527 PCDHB18P-201ENST00000524813 2368 ntBASIC20.54■□□□□ 0.88
KRT9P35527 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
KRT9P35527 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT9P35527 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT9P35527 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms