Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.4■□□□□ 0.38
LCN1P31025 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LCN1P31025 TSPY7P-201ENST00000431358 1114 ntBASIC17.4■□□□□ 0.38
LCN1P31025 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 SNORA78-201ENST00000459373 127 ntBASIC17.4■□□□□ 0.38
LCN1P31025 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.4■□□□□ 0.38
LCN1P31025 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LCN1P31025 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LCN1P31025 NEFHP1-201ENST00000412845 2629 ntBASIC17.4■□□□□ 0.38
LCN1P31025 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
LCN1P31025 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LCN1P31025 AC020763.4-201ENST00000623414 4170 ntBASIC17.4■□□□□ 0.38
LCN1P31025 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.39■□□□□ 0.38
LCN1P31025 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LCN1P31025 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LCN1P31025 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LCN1P31025 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LCN1P31025 RBM17P1-201ENST00000453646 1190 ntBASIC17.39■□□□□ 0.37
LCN1P31025 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.39■□□□□ 0.37
LCN1P31025 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.39■□□□□ 0.37
LCN1P31025 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.39■□□□□ 0.37
LCN1P31025 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LCN1P31025 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.39■□□□□ 0.37
LCN1P31025 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LCN1P31025 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
LCN1P31025 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LCN1P31025 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LCN1P31025 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LCN1P31025 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LCN1P31025 KRT8P32-201ENST00000512863 1461 ntBASIC17.38■□□□□ 0.37
LCN1P31025 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
LCN1P31025 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LCN1P31025 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.38■□□□□ 0.37
LCN1P31025 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.38■□□□□ 0.37
LCN1P31025 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.38■□□□□ 0.37
LCN1P31025 FITM1-202ENST00000559294 800 ntBASIC17.38■□□□□ 0.37
LCN1P31025 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
LCN1P31025 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.38■□□□□ 0.37
LCN1P31025 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.38■□□□□ 0.37
LCN1P31025 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.38■□□□□ 0.37
LCN1P31025 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.38■□□□□ 0.37
LCN1P31025 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.38■□□□□ 0.37
LCN1P31025 AC006333.2-201ENST00000607957 2099 ntBASIC17.38■□□□□ 0.37
LCN1P31025 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LCN1P31025 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LCN1P31025 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LCN1P31025 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.37■□□□□ 0.37
LCN1P31025 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
LCN1P31025 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.37■□□□□ 0.37
LCN1P31025 CRYGFP-201ENST00000418459 633 ntBASIC17.37■□□□□ 0.37
LCN1P31025 SLC25A1P2-201ENST00000430693 912 ntBASIC17.37■□□□□ 0.37
LCN1P31025 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.37■□□□□ 0.37
LCN1P31025 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.37■□□□□ 0.37
LCN1P31025 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.37■□□□□ 0.37
LCN1P31025 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
LCN1P31025 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LCN1P31025 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms