Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP24386 NUDT16P1-203ENST00000513809 620 ntBASIC17.57■□□□□ 0.4
CHMP24386 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP24386 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.57■□□□□ 0.4
CHMP24386 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP24386 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP24386 AL031985.4-201ENST00000642138 673 ntBASIC17.57■□□□□ 0.4
CHMP24386 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP24386 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP24386 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMP24386 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CHMP24386 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMP24386 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMP24386 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP24386 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
CHMP24386 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP24386 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP24386 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHMP24386 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP24386 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.56■□□□□ 0.4
CHMP24386 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP24386 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP24386 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.56■□□□□ 0.4
CHMP24386 AC026271.3-201ENST00000571884 352 ntBASIC17.56■□□□□ 0.4
CHMP24386 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP24386 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMP24386 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMP24386 AC131212.4-201ENST00000623606 975 ntBASIC17.56■□□□□ 0.4
CHMP24386 AC073912.3-201ENST00000624414 853 ntBASIC17.56■□□□□ 0.4
CHMP24386 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMP24386 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CHMP24386 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHMP24386 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 IRX1P1-201ENST00000438849 1838 ntBASIC17.56■□□□□ 0.4
CHMP24386 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 AC104417.2-201ENST00000562989 1793 ntBASIC17.56■□□□□ 0.4
CHMP24386 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CHMP24386 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMP24386 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMP24386 BICD1-207ENST00000551848 1962 ntBASIC17.55■□□□□ 0.4
CHMP24386 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CHMP24386 AP003071.4-201ENST00000562276 1284 ntBASIC17.55■□□□□ 0.4
CHMP24386 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP24386 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CHMP24386 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CHMP24386 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP24386 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP24386 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP24386 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP24386 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP24386 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP24386 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP24386 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHMP24386 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP24386 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms