Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
PTPN1P18031 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PTPN1P18031 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN1P18031 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN1P18031 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.89■□□□□ 0.77
PTPN1P18031 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN1P18031 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN1P18031 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN1P18031 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN1P18031 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN1P18031 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN1P18031 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN1P18031 MIR564-202ENST00000385049 94 ntBASIC19.88■□□□□ 0.77
PTPN1P18031 AC063952.2-201ENST00000498792 1227 ntBASIC19.88■□□□□ 0.77
PTPN1P18031 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN1P18031 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN1P18031 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN1P18031 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.88■□□□□ 0.77
PTPN1P18031 AL590326.2-201ENST00000625139 305 ntBASIC19.88■□□□□ 0.77
PTPN1P18031 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
PTPN1P18031 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN1P18031 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN1P18031 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN1P18031 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 HEIH-201ENST00000623091 1652 ntBASIC19.87■□□□□ 0.77
PTPN1P18031 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN1P18031 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPN1P18031 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PTPN1P18031 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPN1P18031 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN1P18031 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN1P18031 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN1P18031 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN1P18031 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN1P18031 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPN1P18031 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPN1P18031 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN1P18031 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPN1P18031 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN1P18031 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPN1P18031 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.86■□□□□ 0.77
PTPN1P18031 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.86■□□□□ 0.77
PTPN1P18031 GCSHP2-201ENST00000560971 527 ntBASIC19.86■□□□□ 0.77
PTPN1P18031 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.86■□□□□ 0.77
PTPN1P18031 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PTPN1P18031 AC083906.6-201ENST00000641366 219 ntBASIC19.86■□□□□ 0.77
PTPN1P18031 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 AC087289.5-201ENST00000586076 3175 ntBASIC19.86■□□□□ 0.77
PTPN1P18031 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN1P18031 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPN1P18031 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN1P18031 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTPN1P18031 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTPN1P18031 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN1P18031 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN1P18031 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms