Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.6■■□□□ 1.05
SCG2P13521 WWOX-216ENST00000569818 525 ntBASIC21.6■■□□□ 1.05
SCG2P13521 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCG2P13521 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SCG2P13521 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.6■■□□□ 1.05
SCG2P13521 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
SCG2P13521 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SCG2P13521 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SCG2P13521 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 Z98044.1-201ENST00000632503 1764 ntBASIC21.59■■□□□ 1.05
SCG2P13521 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.59■■□□□ 1.05
SCG2P13521 MIR564-202ENST00000385049 94 ntBASIC21.59■■□□□ 1.05
SCG2P13521 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.59■■□□□ 1.05
SCG2P13521 RN7SL850P-201ENST00000579959 291 ntBASIC21.59■■□□□ 1.05
SCG2P13521 AC004408.2-201ENST00000623613 2777 ntBASIC21.59■■□□□ 1.05
SCG2P13521 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.59■■□□□ 1.05
SCG2P13521 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SCG2P13521 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.59■■□□□ 1.05
SCG2P13521 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCG2P13521 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SCG2P13521 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.58■■□□□ 1.05
SCG2P13521 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.58■■□□□ 1.05
SCG2P13521 ANO7L1-203ENST00000602586 1720 ntBASIC21.58■■□□□ 1.05
SCG2P13521 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SCG2P13521 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.58■■□□□ 1.05
SCG2P13521 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SCG2P13521 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.58■■□□□ 1.05
SCG2P13521 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.58■■□□□ 1.05
SCG2P13521 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.58■■□□□ 1.05
SCG2P13521 AC005363.2-201ENST00000618631 242 ntBASIC21.58■■□□□ 1.05
SCG2P13521 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SCG2P13521 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.58■■□□□ 1.05
SCG2P13521 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCG2P13521 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SCG2P13521 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
SCG2P13521 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
SCG2P13521 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCG2P13521 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SCG2P13521 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
SCG2P13521 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.57■■□□□ 1.04
SCG2P13521 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.57■■□□□ 1.04
SCG2P13521 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SCG2P13521 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.57■■□□□ 1.04
SCG2P13521 AC113347.1-201ENST00000413321 391 ntBASIC21.57■■□□□ 1.04
SCG2P13521 AC010203.1-204ENST00000548782 407 ntBASIC21.57■■□□□ 1.04
SCG2P13521 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.57■■□□□ 1.04
SCG2P13521 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SCG2P13521 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCG2P13521 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SCG2P13521 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SCG2P13521 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
SCG2P13521 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.56■■□□□ 1.04
SCG2P13521 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.56■■□□□ 1.04
SCG2P13521 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SCG2P13521 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.56■■□□□ 1.04
SCG2P13521 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.56■■□□□ 1.04
SCG2P13521 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SCG2P13521 AL512604.3-201ENST00000569583 964 ntBASIC21.56■■□□□ 1.04
SCG2P13521 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SCG2P13521 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SCG2P13521 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCG2P13521 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms