Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEPDP12955 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEPDP12955 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PEPDP12955 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 TSPY15P-201ENST00000457163 923 ntBASIC17.39■□□□□ 0.37
PEPDP12955 AC011506.1-201ENST00000474329 610 ntBASIC17.39■□□□□ 0.37
PEPDP12955 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.39■□□□□ 0.37
PEPDP12955 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.39■□□□□ 0.37
PEPDP12955 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PEPDP12955 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEPDP12955 RCC2P6-201ENST00000526625 1557 ntBASIC17.39■□□□□ 0.37
PEPDP12955 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PEPDP12955 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PEPDP12955 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.38■□□□□ 0.37
PEPDP12955 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PEPDP12955 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 MMP23A-201ENST00000234610 1017 ntBASIC17.38■□□□□ 0.37
PEPDP12955 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.38■□□□□ 0.37
PEPDP12955 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PEPDP12955 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PEPDP12955 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.38■□□□□ 0.37
PEPDP12955 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PEPDP12955 Z85996.1-201ENST00000494644 937 ntBASIC17.38■□□□□ 0.37
PEPDP12955 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.38■□□□□ 0.37
PEPDP12955 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.38■□□□□ 0.37
PEPDP12955 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.38■□□□□ 0.37
PEPDP12955 AC011298.2-201ENST00000617989 482 ntBASIC17.38■□□□□ 0.37
PEPDP12955 AC130371.2-201ENST00000619443 611 ntBASIC17.38■□□□□ 0.37
PEPDP12955 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.38■□□□□ 0.37
PEPDP12955 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.38■□□□□ 0.37
PEPDP12955 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PEPDP12955 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEPDP12955 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PEPDP12955 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.38■□□□□ 0.37
PEPDP12955 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PEPDP12955 MESTP1-201ENST00000404287 994 ntBASIC17.37■□□□□ 0.37
PEPDP12955 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.37■□□□□ 0.37
PEPDP12955 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.37■□□□□ 0.37
PEPDP12955 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.37■□□□□ 0.37
PEPDP12955 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PEPDP12955 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.37■□□□□ 0.37
PEPDP12955 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.37■□□□□ 0.37
PEPDP12955 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.37■□□□□ 0.37
PEPDP12955 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.37■□□□□ 0.37
PEPDP12955 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.37■□□□□ 0.37
PEPDP12955 AC079598.2-202ENST00000546624 1451 ntBASIC17.37■□□□□ 0.37
PEPDP12955 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PEPDP12955 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.36■□□□□ 0.37
PEPDP12955 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PEPDP12955 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.36■□□□□ 0.37
PEPDP12955 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.36■□□□□ 0.37
PEPDP12955 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PEPDP12955 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms