Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AC104819.1-201ENST00000504587 486 ntBASIC21.02■□□□□ 0.96
RARBP10826 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 AC090616.6-201ENST00000582640 721 ntBASIC21.02■□□□□ 0.96
RARBP10826 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.02■□□□□ 0.96
RARBP10826 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RARBP10826 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RARBP10826 AL109659.2-201ENST00000606809 1674 ntBASIC21.02■□□□□ 0.95
RARBP10826 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.02■□□□□ 0.95
RARBP10826 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.02■□□□□ 0.95
RARBP10826 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.02■□□□□ 0.95
RARBP10826 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.01■□□□□ 0.95
RARBP10826 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RARBP10826 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.01■□□□□ 0.95
RARBP10826 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RARBP10826 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.01■□□□□ 0.95
RARBP10826 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.01■□□□□ 0.95
RARBP10826 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RARBP10826 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.01■□□□□ 0.95
RARBP10826 AC010240.3-201ENST00000607688 395 ntBASIC21.01■□□□□ 0.95
RARBP10826 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.01■□□□□ 0.95
RARBP10826 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.01■□□□□ 0.95
RARBP10826 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RARBP10826 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
RARBP10826 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RARBP10826 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 TCF3P1-201ENST00000423021 1937 ntBASIC21■□□□□ 0.95
RARBP10826 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21■□□□□ 0.95
RARBP10826 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RARBP10826 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RARBP10826 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21■□□□□ 0.95
RARBP10826 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21■□□□□ 0.95
RARBP10826 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21■□□□□ 0.95
RARBP10826 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21■□□□□ 0.95
RARBP10826 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21■□□□□ 0.95
RARBP10826 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 AC104390.1-201ENST00000555663 520 ntBASIC21■□□□□ 0.95
RARBP10826 AC005332.3-201ENST00000589904 676 ntBASIC21■□□□□ 0.95
RARBP10826 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21■□□□□ 0.95
RARBP10826 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RARBP10826 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21■□□□□ 0.95
RARBP10826 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
RARBP10826 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21■□□□□ 0.95
RARBP10826 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RARBP10826 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21■□□□□ 0.95
RARBP10826 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21■□□□□ 0.95
RARBP10826 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RARBP10826 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RARBP10826 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.99■□□□□ 0.95
RARBP10826 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.99■□□□□ 0.95
RARBP10826 AP003733.1-201ENST00000491725 852 ntBASIC20.99■□□□□ 0.95
RARBP10826 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.99■□□□□ 0.95
RARBP10826 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.99■□□□□ 0.95
RARBP10826 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.99■□□□□ 0.95
RARBP10826 IGHV3-41-201ENST00000613121 348 ntBASIC20.99■□□□□ 0.95
RARBP10826 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RARBP10826 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RARBP10826 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.99■□□□□ 0.95
RARBP10826 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
RARBP10826 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.99■□□□□ 0.95
RARBP10826 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.99■□□□□ 0.95
RARBP10826 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 RCC2P3-201ENST00000418112 1537 ntBASIC20.99■□□□□ 0.95
RARBP10826 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RARBP10826 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RARBP10826 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.98■□□□□ 0.95
RARBP10826 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms