Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
UBCP0CG48 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBCP0CG48 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBCP0CG48 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 AC018470.1-201ENST00000624790 3129 ntBASIC16.49■□□□□ 0.23
UBCP0CG48 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 AL354751.1-201ENST00000412768 1863 ntBASIC16.49■□□□□ 0.23
UBCP0CG48 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.49■□□□□ 0.23
UBCP0CG48 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 AC104771.1-201ENST00000603335 964 ntBASIC16.49■□□□□ 0.23
UBCP0CG48 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 AC073592.3-201ENST00000625118 1834 ntBASIC16.49■□□□□ 0.23
UBCP0CG48 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.49■□□□□ 0.23
UBCP0CG48 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBCP0CG48 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.48■□□□□ 0.23
UBCP0CG48 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
UBCP0CG48 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.48■□□□□ 0.23
UBCP0CG48 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.48■□□□□ 0.23
UBCP0CG48 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBCP0CG48 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
UBCP0CG48 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.48■□□□□ 0.23
UBCP0CG48 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.47■□□□□ 0.23
UBCP0CG48 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
UBCP0CG48 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.47■□□□□ 0.23
UBCP0CG48 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UBCP0CG48 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.47■□□□□ 0.23
UBCP0CG48 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.47■□□□□ 0.23
UBCP0CG48 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.47■□□□□ 0.23
UBCP0CG48 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.47■□□□□ 0.23
UBCP0CG48 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.47■□□□□ 0.23
UBCP0CG48 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.47■□□□□ 0.23
UBCP0CG48 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
UBCP0CG48 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBCP0CG48 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBCP0CG48 HEIH-201ENST00000623091 1652 ntBASIC16.46■□□□□ 0.23
UBCP0CG48 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms