Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 AL162741.1-201ENST00000565563 1558 ntBASIC20.15■□□□□ 0.82
CSPG5O95196 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CSPG5O95196 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CSPG5O95196 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.15■□□□□ 0.82
CSPG5O95196 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.15■□□□□ 0.82
CSPG5O95196 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSPG5O95196 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CSPG5O95196 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CSPG5O95196 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.14■□□□□ 0.81
CSPG5O95196 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CSPG5O95196 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.14■□□□□ 0.81
CSPG5O95196 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 AL023284.2-201ENST00000405850 579 ntBASIC20.14■□□□□ 0.81
CSPG5O95196 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.14■□□□□ 0.81
CSPG5O95196 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CSPG5O95196 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.14■□□□□ 0.81
CSPG5O95196 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.14■□□□□ 0.81
CSPG5O95196 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CSPG5O95196 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSPG5O95196 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
CSPG5O95196 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CSPG5O95196 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.13■□□□□ 0.81
CSPG5O95196 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.13■□□□□ 0.81
CSPG5O95196 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 FOSL1P1-201ENST00000511041 816 ntBASIC20.13■□□□□ 0.81
CSPG5O95196 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.13■□□□□ 0.81
CSPG5O95196 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.13■□□□□ 0.81
CSPG5O95196 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CSPG5O95196 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSPG5O95196 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CSPG5O95196 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.12■□□□□ 0.81
CSPG5O95196 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CSPG5O95196 AL022342.1-201ENST00000400363 863 ntBASIC20.12■□□□□ 0.81
CSPG5O95196 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSPG5O95196 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.12■□□□□ 0.81
CSPG5O95196 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.12■□□□□ 0.81
CSPG5O95196 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CSPG5O95196 AC079781.3-201ENST00000449110 356 ntBASIC20.12■□□□□ 0.81
CSPG5O95196 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.12■□□□□ 0.81
CSPG5O95196 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.12■□□□□ 0.81
CSPG5O95196 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CSPG5O95196 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.12■□□□□ 0.81
CSPG5O95196 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms