Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.85■□□□□ 0.29
PFDN1O60925 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.85■□□□□ 0.29
PFDN1O60925 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PFDN1O60925 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.85■□□□□ 0.29
PFDN1O60925 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PFDN1O60925 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.85■□□□□ 0.29
PFDN1O60925 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.85■□□□□ 0.29
PFDN1O60925 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PFDN1O60925 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PFDN1O60925 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PFDN1O60925 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PFDN1O60925 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 MIR4281-201ENST00000580852 62 ntBASIC16.84■□□□□ 0.29
PFDN1O60925 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PFDN1O60925 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PFDN1O60925 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.84■□□□□ 0.29
PFDN1O60925 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.84■□□□□ 0.29
PFDN1O60925 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.84■□□□□ 0.29
PFDN1O60925 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.84■□□□□ 0.29
PFDN1O60925 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PFDN1O60925 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.84■□□□□ 0.29
PFDN1O60925 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PFDN1O60925 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.83■□□□□ 0.29
PFDN1O60925 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
PFDN1O60925 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PFDN1O60925 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PFDN1O60925 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PFDN1O60925 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
PFDN1O60925 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PFDN1O60925 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PFDN1O60925 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PFDN1O60925 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
PFDN1O60925 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.83■□□□□ 0.28
PFDN1O60925 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PFDN1O60925 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PFDN1O60925 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PFDN1O60925 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.83■□□□□ 0.28
PFDN1O60925 AL121761.2-201ENST00000598007 1648 ntBASIC16.83■□□□□ 0.28
PFDN1O60925 AL662844.4-201ENST00000606367 2838 ntBASIC16.83■□□□□ 0.28
PFDN1O60925 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.83■□□□□ 0.28
PFDN1O60925 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.83■□□□□ 0.28
PFDN1O60925 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PFDN1O60925 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.82■□□□□ 0.28
PFDN1O60925 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.82■□□□□ 0.28
PFDN1O60925 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PFDN1O60925 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms