Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PLOD3O60568 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PLOD3O60568 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PLOD3O60568 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PLOD3O60568 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.73■□□□□ 0.43
PLOD3O60568 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.73■□□□□ 0.43
PLOD3O60568 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.73■□□□□ 0.43
PLOD3O60568 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PLOD3O60568 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PLOD3O60568 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PLOD3O60568 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PLOD3O60568 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
PLOD3O60568 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
PLOD3O60568 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PLOD3O60568 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PLOD3O60568 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 AL355355.2-201ENST00000442321 338 ntBASIC17.72■□□□□ 0.43
PLOD3O60568 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.72■□□□□ 0.43
PLOD3O60568 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.72■□□□□ 0.43
PLOD3O60568 AC026471.5-201ENST00000615068 467 ntBASIC17.72■□□□□ 0.43
PLOD3O60568 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PLOD3O60568 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
PLOD3O60568 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PLOD3O60568 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.72■□□□□ 0.43
PLOD3O60568 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PLOD3O60568 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PLOD3O60568 AC096733.2-201ENST00000609937 1394 ntBASIC17.71■□□□□ 0.43
PLOD3O60568 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
PLOD3O60568 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.71■□□□□ 0.43
PLOD3O60568 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.71■□□□□ 0.43
PLOD3O60568 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.71■□□□□ 0.43
PLOD3O60568 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.71■□□□□ 0.43
PLOD3O60568 REXO1L10P-201ENST00000615707 1290 ntBASIC17.71■□□□□ 0.43
PLOD3O60568 REXO1L12P-201ENST00000622156 912 ntBASIC17.71■□□□□ 0.43
PLOD3O60568 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.71■□□□□ 0.43
PLOD3O60568 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PLOD3O60568 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PLOD3O60568 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PLOD3O60568 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.7■□□□□ 0.42
PLOD3O60568 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.7■□□□□ 0.42
PLOD3O60568 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.7■□□□□ 0.42
PLOD3O60568 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PLOD3O60568 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.7■□□□□ 0.42
PLOD3O60568 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.7■□□□□ 0.42
PLOD3O60568 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PLOD3O60568 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PLOD3O60568 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PLOD3O60568 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PLOD3O60568 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PLOD3O60568 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PLOD3O60568 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PLOD3O60568 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms