Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LCMT2O60294 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.96■□□□□ 0.47
LCMT2O60294 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.96■□□□□ 0.47
LCMT2O60294 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
LCMT2O60294 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LCMT2O60294 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.96■□□□□ 0.47
LCMT2O60294 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.96■□□□□ 0.47
LCMT2O60294 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LCMT2O60294 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LCMT2O60294 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.96■□□□□ 0.47
LCMT2O60294 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCMT2O60294 AL109659.2-201ENST00000606809 1674 ntBASIC17.96■□□□□ 0.47
LCMT2O60294 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.46
LCMT2O60294 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LCMT2O60294 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
LCMT2O60294 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.95■□□□□ 0.46
LCMT2O60294 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LCMT2O60294 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.95■□□□□ 0.46
LCMT2O60294 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
LCMT2O60294 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LCMT2O60294 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.95■□□□□ 0.46
LCMT2O60294 AL031598.1-201ENST00000561511 1773 ntBASIC17.95■□□□□ 0.46
LCMT2O60294 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 ECEL1P3-201ENST00000427961 737 ntBASIC17.95■□□□□ 0.46
LCMT2O60294 MCCD1P1-208ENST00000445732 328 ntBASIC17.95■□□□□ 0.46
LCMT2O60294 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LCMT2O60294 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 AL357033.4-201ENST00000617703 1807 ntBASIC17.95■□□□□ 0.46
LCMT2O60294 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCMT2O60294 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LCMT2O60294 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.94■□□□□ 0.46
LCMT2O60294 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.94■□□□□ 0.46
LCMT2O60294 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.94■□□□□ 0.46
LCMT2O60294 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LCMT2O60294 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LCMT2O60294 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LCMT2O60294 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
LCMT2O60294 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.94■□□□□ 0.46
LCMT2O60294 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.94■□□□□ 0.46
LCMT2O60294 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.94■□□□□ 0.46
LCMT2O60294 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.94■□□□□ 0.46
LCMT2O60294 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.94■□□□□ 0.46
LCMT2O60294 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.94■□□□□ 0.46
LCMT2O60294 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.94■□□□□ 0.46
LCMT2O60294 KRT8P45-201ENST00000414328 1447 ntBASIC17.94■□□□□ 0.46
LCMT2O60294 AC093525.10-201ENST00000625130 1569 ntBASIC17.94■□□□□ 0.46
LCMT2O60294 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.94■□□□□ 0.46
LCMT2O60294 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LCMT2O60294 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LCMT2O60294 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.93■□□□□ 0.46
LCMT2O60294 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
LCMT2O60294 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.93■□□□□ 0.46
LCMT2O60294 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
LCMT2O60294 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.93■□□□□ 0.46
LCMT2O60294 CR769767.2-201ENST00000622735 460 ntBASIC17.93■□□□□ 0.46
LCMT2O60294 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LCMT2O60294 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.93■□□□□ 0.46
LCMT2O60294 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
LCMT2O60294 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LCMT2O60294 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LCMT2O60294 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LCMT2O60294 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LCMT2O60294 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.92■□□□□ 0.46
LCMT2O60294 HMGA1P5-201ENST00000412453 271 ntBASIC17.92■□□□□ 0.46
LCMT2O60294 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.92■□□□□ 0.46
LCMT2O60294 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms