Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.1■□□□□ 0.65
RIPK2O43353 HLA-B-256ENST00000639848 1089 ntBASIC19.1■□□□□ 0.65
RIPK2O43353 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RIPK2O43353 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RIPK2O43353 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RIPK2O43353 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RIPK2O43353 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 AC139713.2-201ENST00000641328 2723 ntBASIC19.09■□□□□ 0.65
RIPK2O43353 AC093677.2-201ENST00000600169 1863 ntBASIC19.09■□□□□ 0.65
RIPK2O43353 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.09■□□□□ 0.65
RIPK2O43353 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.09■□□□□ 0.65
RIPK2O43353 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
RIPK2O43353 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RIPK2O43353 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RIPK2O43353 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.09■□□□□ 0.65
RIPK2O43353 AC026271.2-201ENST00000428091 497 ntBASIC19.09■□□□□ 0.65
RIPK2O43353 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.09■□□□□ 0.65
RIPK2O43353 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.09■□□□□ 0.65
RIPK2O43353 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.09■□□□□ 0.65
RIPK2O43353 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
RIPK2O43353 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
RIPK2O43353 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.09■□□□□ 0.65
RIPK2O43353 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RIPK2O43353 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RIPK2O43353 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.08■□□□□ 0.65
RIPK2O43353 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.08■□□□□ 0.65
RIPK2O43353 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.08■□□□□ 0.65
RIPK2O43353 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
RIPK2O43353 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.08■□□□□ 0.64
RIPK2O43353 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.08■□□□□ 0.64
RIPK2O43353 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.08■□□□□ 0.64
RIPK2O43353 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.08■□□□□ 0.64
RIPK2O43353 AC080038.1-201ENST00000611274 1154 ntBASIC19.08■□□□□ 0.64
RIPK2O43353 HLA-A-209ENST00000638375 975 ntBASIC19.08■□□□□ 0.64
RIPK2O43353 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RIPK2O43353 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RIPK2O43353 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RIPK2O43353 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RIPK2O43353 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RIPK2O43353 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.08■□□□□ 0.64
RIPK2O43353 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RIPK2O43353 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RIPK2O43353 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.08■□□□□ 0.64
RIPK2O43353 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RIPK2O43353 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RIPK2O43353 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.08■□□□□ 0.64
RIPK2O43353 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RIPK2O43353 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RIPK2O43353 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.07■□□□□ 0.64
RIPK2O43353 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 MIR663A-201ENST00000385250 93 ntBASIC19.07■□□□□ 0.64
RIPK2O43353 CDCA4P2-201ENST00000441182 718 ntBASIC19.07■□□□□ 0.64
RIPK2O43353 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.07■□□□□ 0.64
RIPK2O43353 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.07■□□□□ 0.64
RIPK2O43353 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.07■□□□□ 0.64
RIPK2O43353 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.07■□□□□ 0.64
RIPK2O43353 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RIPK2O43353 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.07■□□□□ 0.64
RIPK2O43353 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms