Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN5O00501 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLDN5O00501 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLDN5O00501 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.82■□□□□ 0.76
CLDN5O00501 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.82■□□□□ 0.76
CLDN5O00501 AC063952.2-201ENST00000498792 1227 ntBASIC19.82■□□□□ 0.76
CLDN5O00501 AC022616.7-201ENST00000525383 220 ntBASIC19.82■□□□□ 0.76
CLDN5O00501 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN5O00501 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN5O00501 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN5O00501 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CLDN5O00501 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN5O00501 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN5O00501 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN5O00501 AC024243.1-201ENST00000609234 778 ntBASIC19.81■□□□□ 0.76
CLDN5O00501 AL590326.2-201ENST00000625139 305 ntBASIC19.81■□□□□ 0.76
CLDN5O00501 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN5O00501 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN5O00501 HEIH-201ENST00000623091 1652 ntBASIC19.81■□□□□ 0.76
CLDN5O00501 AC120498.9-201ENST00000339021 3867 ntBASIC19.8■□□□□ 0.76
CLDN5O00501 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN5O00501 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN5O00501 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
CLDN5O00501 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN5O00501 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN5O00501 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN5O00501 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN5O00501 NEK4P2-201ENST00000580004 1012 ntBASIC19.8■□□□□ 0.76
CLDN5O00501 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.8■□□□□ 0.76
CLDN5O00501 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN5O00501 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN5O00501 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.8■□□□□ 0.76
CLDN5O00501 AC006333.2-201ENST00000607957 2099 ntBASIC19.8■□□□□ 0.76
CLDN5O00501 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLDN5O00501 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN5O00501 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN5O00501 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN5O00501 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN5O00501 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN5O00501 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN5O00501 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CLDN5O00501 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 MIR564-202ENST00000385049 94 ntBASIC19.79■□□□□ 0.76
CLDN5O00501 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN5O00501 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN5O00501 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN5O00501 KRT18P38-201ENST00000449496 1282 ntBASIC19.79■□□□□ 0.76
CLDN5O00501 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN5O00501 AL359075.1-203ENST00000462729 1002 ntBASIC19.79■□□□□ 0.76
CLDN5O00501 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN5O00501 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.79■□□□□ 0.76
CLDN5O00501 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLDN5O00501 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN5O00501 AL031432.5-201ENST00000641059 760 ntBASIC19.79■□□□□ 0.76
CLDN5O00501 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN5O00501 MTMR9LP-203ENST00000426597 1545 ntBASIC19.79■□□□□ 0.76
CLDN5O00501 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms