Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.74■□□□□ 0.43
CLIC1O00299 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 AL355802.2-201ENST00000402069 882 ntBASIC17.74■□□□□ 0.43
CLIC1O00299 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.74■□□□□ 0.43
CLIC1O00299 Z85996.1-201ENST00000494644 937 ntBASIC17.74■□□□□ 0.43
CLIC1O00299 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.74■□□□□ 0.43
CLIC1O00299 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.74■□□□□ 0.43
CLIC1O00299 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.74■□□□□ 0.43
CLIC1O00299 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.74■□□□□ 0.43
CLIC1O00299 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLIC1O00299 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIC1O00299 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.73■□□□□ 0.43
CLIC1O00299 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.73■□□□□ 0.43
CLIC1O00299 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLIC1O00299 POU5F1P3-201ENST00000428824 1078 ntBASIC17.73■□□□□ 0.43
CLIC1O00299 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.73■□□□□ 0.43
CLIC1O00299 KRT16P5-201ENST00000455284 522 ntBASIC17.73■□□□□ 0.43
CLIC1O00299 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.73■□□□□ 0.43
CLIC1O00299 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.73■□□□□ 0.43
CLIC1O00299 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.73■□□□□ 0.43
CLIC1O00299 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 AC092666.2-201ENST00000613287 246 ntBASIC17.73■□□□□ 0.43
CLIC1O00299 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.73■□□□□ 0.43
CLIC1O00299 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CLIC1O00299 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.73■□□□□ 0.43
CLIC1O00299 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CLIC1O00299 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLIC1O00299 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLIC1O00299 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 NOC2LP2-201ENST00000407594 1944 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CLIC1O00299 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 BCL2-203ENST00000589955 5011 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLIC1O00299 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CLIC1O00299 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CLIC1O00299 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 AC026366.1-201ENST00000488803 879 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 RNA5SP413-201ENST00000516373 109 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 AC090192.1-201ENST00000517740 490 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.72■□□□□ 0.43
CLIC1O00299 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.72■□□□□ 0.43
CLIC1O00299 AL023875.1-201ENST00000640777 796 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 AC068587.9-201ENST00000641814 219 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.72■□□□□ 0.43
CLIC1O00299 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CLIC1O00299 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 MTMR9LP-203ENST00000426597 1545 ntBASIC17.72■□□□□ 0.43
CLIC1O00299 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLIC1O00299 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms