Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
AP4M1O00189 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
AP4M1O00189 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4M1O00189 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
AP4M1O00189 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4M1O00189 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP4M1O00189 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AP4M1O00189 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4M1O00189 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4M1O00189 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4M1O00189 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4M1O00189 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
AP4M1O00189 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4M1O00189 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP4M1O00189 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
AP4M1O00189 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP4M1O00189 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.49■□□□□ 0.07
AP4M1O00189 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4M1O00189 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.49■□□□□ 0.07
AP4M1O00189 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.49■□□□□ 0.07
AP4M1O00189 RARRES2P10-201ENST00000564312 460 ntBASIC15.49■□□□□ 0.07
AP4M1O00189 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.49■□□□□ 0.07
AP4M1O00189 AP001412.1-201ENST00000608405 714 ntBASIC15.49■□□□□ 0.07
AP4M1O00189 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
AP4M1O00189 AC066615.1-201ENST00000640911 628 ntBASIC15.49■□□□□ 0.07
AP4M1O00189 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.49■□□□□ 0.07
AP4M1O00189 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP4M1O00189 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP4M1O00189 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
AP4M1O00189 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP4M1O00189 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.48■□□□□ 0.07
AP4M1O00189 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.48■□□□□ 0.07
AP4M1O00189 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 AL691432.2-201ENST00000607222 2038 ntBASIC15.48■□□□□ 0.07
AP4M1O00189 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.48■□□□□ 0.07
AP4M1O00189 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.48■□□□□ 0.07
AP4M1O00189 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
AP4M1O00189 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.48■□□□□ 0.07
AP4M1O00189 AL353807.1-201ENST00000427475 662 ntBASIC15.48■□□□□ 0.07
AP4M1O00189 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.48■□□□□ 0.07
AP4M1O00189 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.48■□□□□ 0.07
AP4M1O00189 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
AP4M1O00189 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.48■□□□□ 0.07
AP4M1O00189 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.48■□□□□ 0.07
AP4M1O00189 AC008550.1-201ENST00000511500 884 ntBASIC15.48■□□□□ 0.07
AP4M1O00189 AC093827.2-201ENST00000512654 315 ntBASIC15.48■□□□□ 0.07
AP4M1O00189 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.48■□□□□ 0.07
AP4M1O00189 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.48■□□□□ 0.07
AP4M1O00189 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP4M1O00189 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms