Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPIPB4C9JG80 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
NPIPB4C9JG80 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
NPIPB4C9JG80 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 BICD1-207ENST00000551848 1962 ntBASIC16.64■□□□□ 0.25
NPIPB4C9JG80 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 CRYGFP-201ENST00000418459 633 ntBASIC16.64■□□□□ 0.25
NPIPB4C9JG80 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 AL023803.3-201ENST00000615559 522 ntBASIC16.64■□□□□ 0.25
NPIPB4C9JG80 GPAT2P1-201ENST00000444924 1672 ntBASIC16.64■□□□□ 0.25
NPIPB4C9JG80 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB4C9JG80 AC135050.7-201ENST00000624508 2218 ntBASIC16.64■□□□□ 0.25
NPIPB4C9JG80 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 AC008556.1-201ENST00000610908 2040 ntBASIC16.63■□□□□ 0.25
NPIPB4C9JG80 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 RBM17P1-201ENST00000453646 1190 ntBASIC16.63■□□□□ 0.25
NPIPB4C9JG80 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NPIPB4C9JG80 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 TSPY17P-201ENST00000450329 467 ntBASIC16.62■□□□□ 0.25
NPIPB4C9JG80 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 AC126763.1-201ENST00000552015 2118 ntBASIC16.62■□□□□ 0.25
NPIPB4C9JG80 FITM1-202ENST00000559294 800 ntBASIC16.62■□□□□ 0.25
NPIPB4C9JG80 MIR3180-5-201ENST00000583743 153 ntBASIC16.62■□□□□ 0.25
NPIPB4C9JG80 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 AC034236.2-201ENST00000606662 1610 ntBASIC16.62■□□□□ 0.25
NPIPB4C9JG80 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPIPB4C9JG80 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms