Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 KRT18P11-201ENST00000435214 1283 ntBASIC20.28■□□□□ 0.84
USP27XA6NNY8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP27XA6NNY8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP27XA6NNY8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
USP27XA6NNY8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.27■□□□□ 0.84
USP27XA6NNY8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.27■□□□□ 0.84
USP27XA6NNY8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.27■□□□□ 0.84
USP27XA6NNY8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.27■□□□□ 0.84
USP27XA6NNY8 AC026271.2-201ENST00000428091 497 ntBASIC20.27■□□□□ 0.84
USP27XA6NNY8 AC005181.1-201ENST00000604782 1256 ntBASIC20.27■□□□□ 0.84
USP27XA6NNY8 AC092666.2-201ENST00000613287 246 ntBASIC20.27■□□□□ 0.84
USP27XA6NNY8 AC008694.1-202ENST00000636953 945 ntBASIC20.27■□□□□ 0.84
USP27XA6NNY8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP27XA6NNY8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.27■□□□□ 0.83
USP27XA6NNY8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP27XA6NNY8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP27XA6NNY8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP27XA6NNY8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 AC022211.2-201ENST00000585075 2527 ntBASIC20.26■□□□□ 0.83
USP27XA6NNY8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP27XA6NNY8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
USP27XA6NNY8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 AC073210.2-201ENST00000430369 194 ntBASIC20.25■□□□□ 0.83
USP27XA6NNY8 SLC25A6P5-201ENST00000435663 894 ntBASIC20.25■□□□□ 0.83
USP27XA6NNY8 TSPY23P-201ENST00000440136 739 ntBASIC20.25■□□□□ 0.83
USP27XA6NNY8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 AC005829.2-201ENST00000571422 1056 ntBASIC20.25■□□□□ 0.83
USP27XA6NNY8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP27XA6NNY8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP27XA6NNY8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP27XA6NNY8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 RPS2P52-201ENST00000469610 820 ntBASIC20.24■□□□□ 0.83
USP27XA6NNY8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.24■□□□□ 0.83
USP27XA6NNY8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms