Protein–RNA interactions for Protein: A6NI56

CCDC154, Coiled-coil domain-containing protein 154, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC154A6NI56 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC154A6NI56 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC154A6NI56 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CCDC154A6NI56 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.05■□□□□ 0.48
CCDC154A6NI56 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 AC142086.2-201ENST00000569753 217 ntBASIC18.05■□□□□ 0.48
CCDC154A6NI56 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC154A6NI56 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC154A6NI56 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 AC104771.1-201ENST00000603335 964 ntBASIC18.04■□□□□ 0.48
CCDC154A6NI56 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC154A6NI56 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC154A6NI56 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 POM121L13P-201ENST00000422362 380 ntBASIC18.03■□□□□ 0.48
CCDC154A6NI56 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 AC092666.2-201ENST00000613287 246 ntBASIC18.03■□□□□ 0.48
CCDC154A6NI56 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CCDC154A6NI56 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC154A6NI56 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms