Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 TSPY23P-201ENST00000440136 739 ntBASIC13.27□□□□□ -0.29
LINC01546A6NGU7 SUDS3P1-201ENST00000505831 966 ntBASIC13.27□□□□□ -0.29
LINC01546A6NGU7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 AP006587.1-201ENST00000534129 1502 ntBASIC13.27□□□□□ -0.29
LINC01546A6NGU7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LINC01546A6NGU7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 KRT18P16-201ENST00000510337 1294 ntBASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC01546A6NGU7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01546A6NGU7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms