Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC011298.2-201ENST00000617989 482 ntBASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HLA-A-209ENST00000638375 975 ntBASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC090340.1-201ENST00000620778 4980 ntBASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC004951.3-201ENST00000418645 1148 ntBASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AL137013.1-201ENST00000432946 1228 ntBASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RN7SL850P-201ENST00000579959 291 ntBASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC010947.1-201ENST00000623454 693 ntBASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MESTP1-201ENST00000404287 994 ntBASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LIN28AP1-201ENST00000429574 405 ntBASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FAM207BP-201ENST00000447172 505 ntBASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC130371.2-201ENST00000619443 611 ntBASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RCC2P6-201ENST00000526625 1557 ntBASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms