Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 CD177P1-201ENST00000606252 935 ntBASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 DGCR10-201ENST00000609839 495 ntBASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC068587.9-201ENST00000641814 219 ntBASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC090164.3-201ENST00000610780 2143 ntBASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRORSD1P-201ENST00000295112 541 ntBASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 AP000692.2-201ENST00000608391 879 ntBASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC079598.2-202ENST00000546624 1451 ntBASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV6-4A0A1B0GX49 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 FAM197Y1-201ENST00000421178 764 ntBASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC012618.2-201ENST00000428058 849 ntBASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC011506.1-201ENST00000474329 610 ntBASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV6-4A0A1B0GX49 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms