Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 AC007663.1-201ENST00000438948 1240 ntBASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCDC196A0A1B0GTZ2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC196A0A1B0GTZ2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC196A0A1B0GTZ2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CCDC196A0A1B0GTZ2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.83■■□□□ 1.08
CCDC196A0A1B0GTZ2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL138781.2-201ENST00000617896 1843 ntBASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC008556.1-201ENST00000610908 2040 ntBASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC196A0A1B0GTZ2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 ANO7L1-203ENST00000602586 1720 ntBASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 AL357033.4-201ENST00000617703 1807 ntBASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC196A0A1B0GTZ2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC196A0A1B0GTZ2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms