Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 AC092118.2-201ENST00000613495 667 ntBASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 AL354751.1-201ENST00000412768 1863 ntBASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 AC018695.7-201ENST00000624587 2492 ntBASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 KRT17P1-201ENST00000399211 1546 ntBASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV8-6A0A0B4J262 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 MST1L-201ENST00000442552 2185 ntBASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 AL390719.1-204ENST00000412397 1219 ntBASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 AC097658.1-201ENST00000475555 843 ntBASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 AL138781.1-201ENST00000566567 1274 ntBASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms