Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV5A0A0B4J249 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 MIR935-201ENST00000401179 91 ntBASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 AC026185.1-201ENST00000445748 174 ntBASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 IKBKGP1-201ENST00000612193 1073 ntBASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 AC120498.8-201ENST00000614275 531 ntBASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 AC092437.1-201ENST00000624794 1048 ntBASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV5A0A0B4J249 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 AL499627.1-201ENST00000569373 2188 ntBASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 CROCCP5-201ENST00000436658 830 ntBASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 AC083906.2-201ENST00000511578 360 ntBASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 AC092118.2-201ENST00000613495 667 ntBASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV5A0A0B4J249 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV5A0A0B4J249 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms