Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC008556.1-201ENST00000610908 2040 ntBASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC239809.2-201ENST00000415381 517 ntBASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 NIFKP9-201ENST00000419265 221 ntBASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC091390.4-202ENST00000476426 537 ntBASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 ESPNP-201ENST00000270691 2015 ntBASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV5-3A0A0A0MS03 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC133681.1-201ENST00000465482 601 ntBASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC124016.1-201ENST00000609552 612 ntBASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC131212.4-201ENST00000623606 975 ntBASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV5-3A0A0A0MS03 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV5-3A0A0A0MS03 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV5-3A0A0A0MS03 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms